Different measures of Codon Usage

Please upload the nucleotide sequence file (in Fasta format), select desired measure(s) and click on the Submit button



OR , you can use the below textbox :


Um(g) mN̂c mN̂′c mN̂cFDS mN̂′cFDS All





Description on the methods:

  • A sample input file in Fasta format.
  • Detail descriptions on the CUB measures:
    • Unevenness measure of a gene(g): Um(g)
    • Improved Effective Number of Codons: mN̂c
    • Improved Effective Number of Codons(Prime): mN̂′c
    • Improved Effective Number of Codons for Four Fold Degenerate Sites: mN̂cFDS
    • Improved Effective Number of Codons(Prime) for Four Fold Degenerate Sites: mN̂′ cFDS
Notice
N.B.:Please do not upload file more than 10MB because of the limited server processing capability and Internet Bandwidth.

Suggestions and comments

For suggestions and comments please mail to S.S. Satapathy